Sentence examples for probe file from inspiring English sources

We start by describing the format of each data set, consisting of a probe file, a point file, and a test file.

These PWMs and DWMs, as well as the prior PWMs, were then used to predict sites in every probe sequence in the microarray probe file.

The probe file was intersected with the dbSNP131 table to create a list of probes with documented SNPs in the C or G of the target CpG (target CpG SNP).

This is especially interesting in the case of microarray probe files or when a functional enrichment needs to be assessed with experimental data involving any of the non-model species included in the repository.

In total, 290 probes, including 10 PM probes and 280 MM probes (Additional file 1) were commercially synthesized at a concentration of 100 μM (Invitrogen Life Technologies, Carlsbad, CA).

The 643 bp amplified sequence was used as a probe (Additional file 3).

A probe design file was created to distribute the probes randomly on an Agilent 22K-featured microarray.

CGI location information was taken from UCSC genome browser CGI specification which was available from Illumina's probe description file.

This would allow every rRNA insert to be targeted by at least one probe (Additional file 2: Figure S1B).

As a result the number of probe-sets retained for transcriptome analysis within a probe mask file remains high, even as more probes are excluded.

Of the mutations detected by aCGH, the largest change of signals was in probes with a mutation in the middle of the probe (Additional file 3).