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We model the GO DAG as a Bayesian Network and we infer the most probable assignments employing the global optimization method of Differential Evolution [ 16], which is adapted for discrete space.
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Seven signals were positively identified, and an eighth was given a probable assignment.
Additional File 7 summarizes the probable assignment patterns for such sequences.
ADAPT-NMR Enhancer offers three active dialog boxes: Main Window Dialog, PINE Assignment Dialog and Probable Assignment Dialog.
The PINE Assignment Dialog box is based on atoms, whereas the Probable Assignment Dialog box is based on peaks.
Given the measured hybridization ratios of all probes, we applied the Viterbi algorithm to find the most probable assignment (MAP) of the S j variables (Rabiner, 1989).
We used an arbitrary e-value cutoff of 10-25 to identify significant homology to a known gene and allow a probable assignment of a sheep contig.
The Probable Assignment Dialog box pops up when a 3D peak from the 3D list box or from the spectral view is selected.
Instead, we build a framework for finding the most probable assignment of sequenced clones to potential structural variants based on the other clones.
We used TREE-PUZZLE (version 5.2; [ 74]) to compute the most probable assignment of rate categories for each position (option w: mixed rate heterogeneity with one invariable and 8 gamma rates).
Because of the equi-probable assignment of hash values with respect to randomly generated data, the population of a given cluster can be modeled via a Poisson process.
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CEO of Professional Science Editing for Scientists @ prosciediting.com