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While these commonly expressed genes had a 99% probability of expression, they were not expressed at the same levels in the different accessions.
We observed a consistent twofold-higher hβ expression from insulated vectors in single-copy mouse erythroleukemia cell clones, an increase that resulted from reduced position effect variegation (PEV) and increased probability of expression from individual integrants.
The very longest genes have a low probability of expression.
A greater potential of gene expression results in a greater probability of expression in AIZ neurons.
For the bulk of the graph the probability of expression slowly increases with gene length.
As a result, poe (i.e., probability of expression) was introduced as a new scale and used in the context of molecular classification [ 8].
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First, under the assumptions u i ~ N 0, σ u 2 ) and ε it ~ N 0,1), it is possible to integrate (throughout the distribution of u i ) the probabilities of expression (4) conditioned in realisations of u i.
From the cumulative information of expression differences (dg, g = 1 to 54675), a histogram of the posterior probabilities of expression differences being less than zero [P dg<0),g = 1,.54675] is determined (Figure S7).
First, the method incorporates biological information into estimating the posterior probabilities of expression.
The expression patterns and posterior probability of differential expression 'posterior probability of differential expression' (PPDE) values of each gene/contig were estimated by EBSeq v1.1.5 21, and the DEGs were identified with PPDE = 1.
With data-driven estimation of these quantities, one can translate the raw expression measurement into a probability of differential expression.
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