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All primary data was downloaded from the ENCODE UCSC browser [ 49, 50] http://genome.ucsc.edu/ENCODE/.ucsc.edu/ENCODE/
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Data was downloaded from esurv.org in Excel spreadsheet form.
Dispensability data was downloaded from http://chemogenomics.stanford.edu/supplements/01yfh/files/orfgenedata.txt [45].edu/supplements/01yfh/files/orfgenedata.txt
MEMS data was downloaded at each four-weekly clinic visit.
Data was downloaded from the device.
Data was downloaded with TCGA-Assembler [ 14].
The data was downloaded from [ 32].
For Illumina data, normalized data was downloaded directly from GEO.
The genomic data was downloaded via the NCBI ftp site.
TEs data was downloaded from TAIR (www.arabidopsis.org).org
A total of 32 GB of sequence data was downloaded.
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