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The primary data files (formatted as wiff and wiff.scan) from 92 clinical samples are available in a public repository site Proteome Commons (https://proteomecommons.org/).org/
The primary data files are available at the NCBI Gene Expression Omnibus repository (Accession number GSE9675).
To represent particular security policies on primary data files is required to find a scheme consisting of the main components involved in the management, distribution, and maintenance of information [ 16]: (i) Subjects.
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All primary expression data files (*.cel) and (*.xls) are available at the authors' web site (http://www.mmdn.univ-montp2.fr/) and at GE O/NCBI(provisional accession number GSE21779).
Primary microarray data files and matrix files are available at NIH GEO repository – GSE20179.
The Analysis module stores high-throughput molecular data obtained by the omics technologies and the data generated after processing of the primary raw data files.
In cases when the external data sets are available only as files, a Galaxy data library can be used; the use of a Galaxy library has the added benefit of preventing the duplication of primary data set file content on the Galaxy server.
The Supporting data are available online at the link: www.mayburd.com The primary data and processing files in Excel format are designated by letter P.
We have described the location details of the primary data and supplementary files in Materials and methods under "Data availability".
Primary data exist as published data files, literature with text, images, Excel files, and other supplementary materials.
Primary data in the text files, generated by the HAAKE RheoWin software, were further treated using a home-made software AWSWork, described in [19].
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