As an additional step to determine the accuracy of the exon array platform and our algorithm, we specifically queried previously reported GBM-specific splicing events within our dataset.
The Uniprot database was queried for previously identified MDR mammal SDHs and yeast SDHs.
Previously published datasets were queried for differential expression of CD31, EAF2 and VHL pathway genes VHL, HIF1A, HIF1AN (Hinhibitorbitor), VEGFA, VEGFB, and VEGFC in human prostate tissue specimens.
We queried a previously described collection of ~450 yeast TS mutants that represent approximately 40% of the essential genes in the yeast genome (Li et al. 2011).
Those who agreed to participate in the study were queried by previously trained interviewers about sociodemographic characteristics, gynecologic obstetric antecedents, alcohol and tobacco consumption, occupation, as well as antecedents concerning the use of pesticides.
BIND was queried for previously unreported homeodomain protein protein interactions in parallel with the aforementioned PubMed literature searches, using general (e.g. 'homeobox OR homeodomain AND interaction') to more specific (e.g. 'homeobox OR homeodomain AND interaction_object_type = protein AND NOT = DNA') search criteria.
When a level ℓ molecule M is synthesized, we first check whether it has been previously synthesized by querying F ℓ.
Reports were embedded in the overview form to query previously entered data.
Note that the value of each examined expression is obtained in a constant time, by querying previously computed values stored in the matrices.
For the purposes of this work, a publication becomes available to the review team when it is indexed in MEDLINE, and therefore is findable using the search queries previously designed for the SR topic.
