The proposed structure presents backbone similarity with the native peptide especially at the N-terminus, which is important for major histocompatibility complex (MHC) binding.
Moreover, the simulation of peptide LLGD presented a backbone hydrogen bond between residues Asp-4 (backbone amide hydrogen atom) and Leu-2 (backbone carbonyl oxygen atom) with an occurrence of 15.1%, while this hydrogen bond occurred in only 6.3% of the simulation of peptide LL'GD.
The structure of no-nucleotide kinesin reported in the X-ray study is in excellent agreement with model presented here (backbone RMSD for all visible residues is 1.28Å).
Most importantly, the tree of the concatenated dataset presented a backbone of seven major clades which could be related to the developmental patterns of the teleomorphs.
It not only presents the backbone of Aristotle's own philosophical theorizing, but has exerted an unparalleled influence on the systems of many of the greatest philosophers in the western tradition.
A final warning, before starting the procedure the PDB file containing the coordinates to be tested should be made appropriate for ROSETTA design, because some modeling programs may give good folding patterns but with local errors in length, angle or dihedrals of a few bonds, may present missing backbone atoms for one or more residues, or have zero or empty B-factors.
LUMO+1 orbitals are delocalized on Ph parts (described below) and they are presented on Si backbone in much less extent.
A computational method is presented for determining backbone curves of arbitrary geometry.
A completely distributed algorithm is presented that allows backbone nodes to adjust their positions based on information about neighbors' position only.
Chang et al. [30] clustered the social relations among individuals using users' location information on the city scale to construct an intercity social relationship network and presented a geographic backbone network extraction method that combines gravity models and information entropy technologies.
