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Most reads that failed to map onto the reference were present in repeated regions.
The "true" decrease in lung function might be even more pronounced than what we found since a learning effect might be present in repeated lung function measurements [ 24].
Given that RNA genes are often present in repeated units which are not resolved in short-read assemblies, we used read coverage values to estimate the copy number of those genes.
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We also dismissed cases where clusters of such paired-end reads were present in repeat regions of the genome.
Other repeat regions show evidence that recombination or translocation of repeat units has occurred, for example sequences more characteristic of repeat units within regions 6 and 8 are present in repeat region 9 of CP220, so either identical sequence changes have occurred at multiple sites or more likely the repeat units have propagated themselves in the phage genome.
PBT is similar in structure to polyethylene terephthalate (PET)—the difference being in the number of methylene (CH2) groups present in the repeating units of the polymer molecules.
Furthermore, 10 also displays an unprecedented representative for a cationic copper halide aggregate, since 7 Cu+ and 6 I– are present in the repeating unit.
The primers amplified from an MLT1A0 dispersed repeat present in full repeats (only, see Figure 1) at DEFA1A3 and a similar repeat at the reference locus on chromosome 1.
Our strategy to rely on similarity searches in order to identify the repetitive fraction of a genome has the obvious pitfall that, if a repeat is not present in the repeat database it will not be detected.
In the present situation, repeated attacks on the agency have weakened it and perhaps left it vulnerable to undue influence from higher-ups.
A search for palindromes within the analogous tandem repeats of T. brucei revealed a 14-bp14-bpndrome (TAAATTTAAATTTA) present in both repeats.
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