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The last option allows one to use private or preliminary datasets.
The preliminary datasets were complemented by data from UniProtKB/TrEMBL, Ensembl release 57, BeeBase (http://genomes.arc.georgetown.edu/drupal/beebase/) and WormBase (http://www.wormbase.org/).org/
The preliminary datasets were "cleaned" from non-GPCRs and GPCRs from other families by searching it against the Refseq database using BLASTN with the default settings.
Preliminary datasets consisted of 470 LHC sequences that fit the criteria above, but individual operational taxonomic units (OTUs) were omitted to reduce the computation time and facilitate the interpretation of the phylogenetic tree.
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Due to the small number of patients in this preliminary dataset, no statistical differences were tested.
We use a preliminary dataset of mESC cultures to demonstrate the feasibility of our approach and to discuss further applications.
Our preliminary dataset indicate that genomic mutations to epigenetic regulators may be more common than previously appreciated.
We compiled a preliminary dataset by retrieving and organizing search results from our selected databases (Shaw et al. 2013).
The preliminary dataset was "cleaned" from non-GPCRs and GPCRs from other families by querying it against the Refseq database using BLASTN with the default settings.
The preliminary dataset contained multiple inpatient visits for some patients and the observations could not be considered as statistically independent, an assumption of the logistic regression model.
In particular, we rely on a preliminary dataset obtained for self-renewing mESCs cultured either under 2i or LIF/serum conditions.
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