When MD and TD ratios became similar, no predominant TD direction fiber alignment and no larger veins were observed.
For each undetectable G-Box, we used our global-npe alignment to identify the predominant evolutionary mechanism that mutated the motif to undetectability in the Br lineage.
The consensus maxicircle genome sequence is derived from the predominant nucleotide present across multiple read alignments at each position.
Having located the stretch of chromosome in Br where the missing CNS could be, we devised a global alignment algorithm, global-npe, to identify the predominant mechanism of removal of CNSs.
We include only people with neutral (−2° valgus to 2° varus) or moderate varus (≤ 10° varus) alignment and medial knee OA and not predominant lateral compartment or severe patellofemoral (PF) compartment disease because (1) the medial compartment is the most common disease site, and (2) medial progression is strongly associated with moderate varus alignment [ 38- 40], independent of BMI [ 41].
A multiple alignment of these predictions readily identified exceptions to the predominant protein structure, largely a result of fusions to adjacent genes or missing exons.
The consideration of this absolute number, rather than a relative proportion of all aligned sequences, allows the handling of representative subsets of these alignments, while ignoring positions in which gaps are predominant.
Varying the alignment and reporting modes allowed the differential detection of two predominant peak sizes of sequencing reads as described in the results section.
Typical DUSPs can be further divided into three groups based on their predominant subcellular locations (nuclear, cytoplasmic, or dually-located), with this grouping also coinciding with their sequence alignment.
Figure 8A shows the read alignments for An02g04860 visualised by IGV, Integrative Genomic Viewer [ 49], and where predominant AS transcription present in dormant conidia changed to S transcription during the first hour of germination.
