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When the comparison was done over a larger set of predicted pairs (we selected the first 800 predictions, that is the total number of predictions provided by the GF method, APPIA was 1.41 times more accurate than the GC method, 3.80 times more accurate than GF, 9.65 times more than PP, 32.38 times more than MT and 47.67 times more accurate than I2H.
Indeed, the actual measurement fell out of this range for only 49 out of the 952 predictions, that is 5.1% of the time (Table S2).
We observed that the actual measurement fell out of this range for only 30 out of the 476 predictions, that is 6.3% of the time (Table S1).
We are reminded here of the community-wide protein structure prediction experiments, CASP, and the category of predictions that is traditionally called homology modeling, but is now more commonly called template-based modeling.
Table 4 shows the fraction of predictions that is shared between two PPPs.
For reference purpose, we also calculate an apparent accuracy for HLAminer predictions that is defined the same as above except ignoring the ambiguity.
Similar(35)
It made predictions that weren't true.
Throughout the evening, he made predictions that were always right.
And he found that hedgehogs made predictions that were far less accurate.
Morris' ability to make statements and predictions that are often so, so wrong is exceptional.
Predictions that were produced by a formula using just test scores and grades were more accurate.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com