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Dataset S1, MAE predictions for cell lines; Dataset S2, Result of whole RNA-seq on clones of GM12878 lymphoblastoid clones DF1 and DF2; Dataset S3, AST-seq data; Dataset S4, Results of the experiment with padlock probe.
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Hence, in our tetraploid study, we could not perform an experimental test of the model's predictions for cell-cycle phasing at the lowest levels of CDC28 dosage.
> -wrap-foot> TEES receives the Interaction XML file as input and returns a new XML file, which includes predictions for the 'Cell' and 'Gene' relationships.
For biological circuits, we need to produce quantitative predictions of cell behavior for a given genotype as consequence of the different molecular interactions.
We validated our model by comparing its predictions for single-cell gene expression distributions with experimental results obtained at different galactose induction levels that were not used to select model parameter values.
Correctly estimated parameter sets with possible variation are required to reproduce model prediction for pure cell-to-cell infection in silico.
This poses a particularly acute challenge for translating model predictions from cell culture, to animal models, to clinical strategies.
Our results show the capillary flow system to be a good model for prediction of cell damage in a stirred bioreactor.
The prestressed cable net [8], [10] and semi-flexible chain net [11] are used to form actin cytoskeleton model for prediction of cell stiffness under mechanical perturbations in two-dimensions.
Analytical modeling based on cell death signaling molecules has been shown to be an independent and useful tool for prediction of cell surviving response to PDT.
The prediction for each cell was deemed significant if its associated one-sided p-value was <0.05 after Bonferroni correction.
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CEO of Professional Science Editing for Scientists @ prosciediting.com