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In this paper, we describe the derivation and validation of two new risk predictions algorithms to predict 5 year risk of moderate-severe kidney disease.
We performed similarity searches using both TBLASTN (on the WGS assembly and on the individual WGS reads) and BLASTP (on the protein predictions) algorithms to retrieve the maximum number of bHLHs encoded by these two genomes.
At the sequence level, putative miRNA regulatory networks are constructed as bipartite graphs where a connection is made between a specific miRNA and its predicated target mRNAs based on the miRNA-target predictions algorithms or target databases.
However, the high rate of spurious occurrences of 6mers on a genome-wide analysis forces the majority of predictions algorithms to mainly focusing on conserved and/or longer seed matches (e.g.: 7-8mer seeds) to restrict the number of false positives.
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None of the target prediction algorithms predict the regulation of HNF4A by let-7 family of miRNAs.
Firstly, RNA prediction algorithms were used to predict SECIS elements.
Transcription factor binding site prediction algorithms tend to over-predict sites.
We identified predicted target genes of miR-218 using four online miRNA target prediction algorithms.
It then runs the energy prediction algorithms.
The app promises no-look capabilities for typing based on their unique prediction algorithms.
Most of the prediction algorithms require lengthy computation time.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com