Sentence examples for prediction protocols from inspiring English sources
By considering the kinetics of convergence one can ensure that this space can be explored rapidly, resulting in computationally efficient structure prediction protocols.
A few studies have also been presented where molecular docking, i.e. a computational method for predicting binding between a ligand and a protein, has been used in redocking experiments [25], [26] and in affinity prediction protocols [27].
Then by using the 'Clustering tool' they could create, and later download, a nonredundant data set, which will be the base of work for extraction of structural descriptors needed in a classic phosphorylation prediction protocols.
Contact: [email protected] Template-based modeling (i.e. homology modeling and protein threading) is becoming more powerful and important for structure prediction along with the PDB growth and the improvement of prediction protocols.
To increase the stringency of the target prediction protocol, we searched for mRNAs simultaneously predicted by five or more different target-prediction programs.
Figure 5 shows the MemBrain-Rasa prediction protocol [8].
The realised target prediction protocol is available at https://github.com/lhm30/PIDGIN.
Open image in new window Fig. 5 The flowchart of MemBrain-Rasa prediction protocol.
The realised target prediction protocol has been packaged and available for download at https://github.com/lhm30/PIDGIN.
Our structure prediction protocol RAGTOP (RNA-As-Graphs Topology Prediction) represents RNA structures as tree graphs and samples graph topologies to produce candidate graphs.
To identify novel phosphopeptide substrates of PTP1B, we developed a computational prediction protocol based on a virtual library of protein sequences with known phosphotyrosine sites.
