Exact(28)
This binary behavior is implicit in the way we compute CCS and how we determine predicted terms and targets of prediction.
However, besides pure precision and recall values, an important property of any function prediction method is the specificity of its predicted terms.
In practice, this results in specificities close to one, regardless of the prediction, as long as the number of predicted terms is relatively small.
As such, they could produce undesirable solutions when applied to a wide range of prediction algorithms such as those outputting a large number of predicted terms.
Colored circles represent the predicted terms for three representative methods as well as two baseline methods.
The predicted terms were based on the commonly accepted models of Pfeffer, Wilson and Geankoplis, Kataoka, Sircar, and Lightfoot.
Similar(32)
An exact match between a predicted term and the corresponding true GO term for a protein indicates a correct prediction; and wrong prediction otherwise.
Clearly, predicting only very general terms is much simpler but much less useful than predicting terms close to the leaves of GO.
To date, a gold standard for predicting term birth weight has not yet been established [ 12– 12].
Table 3 shows that character n-gram similarity was among the most effective features for predicting term variations.
Nahum et al. assessed 20 standard ultrasonic fetal biometric algorithms for their accuracy in predicting term fetal weight.
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