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Moreover, autoregulatory binding sites are rather predicted downstream of TSSs than in the further upstream bins (excluding the first upstream bin).
Consistent with previously described arteriviruses, the putative ORF1a and ORF1b coding regions in both new SHFV variants contain a canonical heptanucleotide "slippery sequence" (UUUAAAC) and predicted downstream pseudoknot structure [7].
The predicted downstream consequences of decreased Th1 recruitment are reduced activation of M1 inflammatory macrophages.
The resulting DNA sequences confirmed that the SV1 attB site is within SCO4383 and the attP site is located, as predicted, downstream of the SV1 genegene.
Predicted downstream effects of ERK1 and ERK2 knockdown treatments on key pathways responsible for mesendoderm development were confirmed by whole mount in situ hybridization experiments.
In contrast to other IS elements with canonical slippery sites like ISCaa4 and ISCaa9, no stimulatory stem-loop structure possibly enhancing ribosomal frameshifting is predicted downstream of the slippery site in ISCaa3 (Additional file 1, Figure S6).
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Specifically, the ability of the model to predict downstream solute concentrations resulting from source removal using surfactants is investigated.
The ability to predict downstream protein purification processes is of great value in the biopharmaceutical industry; saving time, cost and resources.
The contrasting response of OM processing between habitats indicates that habitat-specific changes occur after clearfell harvesting, which inhibit attempts to quantitatively predict downstream cumulative effects.
The first application is for two tropical rivers in Sri Lanka using daily upstream rainfall and discharge data to predict downstream discharge with the minimum implication function type Mamdani fuzzy inference system.
In the third application, daily upstream and tributary discharges were used to predict downstream discharges in a temperate-climate river in China using the TSK type fuzzy inference system with clustering.
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