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Next, only novel predictions are kept: if any predicted complex matches any reference complex with match_thres = 0.5, then that predicted complex is removed.
Before complex prediction, we evaluated the optimal values of DPClus parameters by comparing the predicted complex set with the experimentally determined set of 144 reference complexes.
Our simulation result and the predicted complex structure would be useful in designing antimicrobial inhibitor.
The predicted complex moduli of asphalt mixes from numerical approach are found close to that from the dynamic modulus tests, resulting in a good agreement.
The frequency is obtained as a function of phase shift between the predicted complex signal and the received complex signal given by the αβ-Transformation.
Generally, the smaller the RMSD between the predicted complex structure and its native conformation is, the more similar these two structures are.
The calculation of RMSD requires a prior superimposition of the predicted complex structure onto its native conformation, but the superimposition that minimizes the global RMSD of the predicted complex to the native conformation may be not necessarily the best solution: such superimposition is often compromised by a small number of significantly deviating fragments [51].
A2ML1 is a cysteine-rich protein with a predicted complex disulfide pattern [15], suggesting that A2ML1 possesses a very constrained structure.
Any predicted complex with size greater than three is discarded.
For example, if a predicted complex intersects only one annotated complex, and the size of the intersection is 1, the PPV of that predicted complex will be 1.0.
Let r be a reference complex, c be a predicted complex.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com