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The response surface methodology (RSM) based mathematical models have been developed to predict the identified engine characteristics.
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The kinase prediction tool NetPhosK 1.0 [ 33] predicts the identified phosphorylation site Ser of Rh2b CPD to be a substrate of either CK2 or PKC (protein kinase C).
Although these markers were included in this study, except for IRGM, they did not clearly pop up in the SNP classification tree as best predicting the identified clusters.
This 9850 T>C mtDNA mutation is present in the mitochondrial cytochrome c oxidase III gene, and results in a Leu215Pro amino acid substitution in cytochrome c oxidase protein predicting the identified CCO deficiency.
Experimental results show reasonably good agreement with the forces predicted by the identified model.
Physical test results were compared to results predicted using the identified material parameters.
Targets were predicted for the identified conserved miRNA (see Additional file 4) and grouped by the biological function of the proteins they encode for, as described by UniProt.
It should be noted here that our analyses are largely based on initial genome screening using three computational programs, none of which predicts all the identified genes.
However, given these limitations, the model predicts the mutations identified could theoretically participate in a RAMP1 interface disrupting the efficiency of CLR and RAMP1 dimerization.
As predicted, the analysis identified eh1-like motifs (E-value of 10-75) at 18 sites corresponding to the previously described eh1 motif of FoxD3.
The program SnpEff v2.0b was used to predict the effect of the identified SNPs on B. burgdorferi coding sequence.
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