Sentence examples for precursor predictions from inspiring English sources

Second, we identified all MCEs in the intersection of human-mouse-rat whole genomes that share a sequence of length k≥20 with one of the 321 human miRNA precursor predictions in miRBase.

Nine precursor predictions were apparently intronic in location.

Exploiting their typical stem-loop structure, a large number of computational precursor predictions have been performed [ 1, 27- 34].

It is worth noting that precursor predictions that fall in the same genome region but on opposite strands cannot be grouped with the position ranking tool, but fall into the same precursor similarity group.

Four precursor predictions fell within or overlapped annotated coding or UTR exons although homology searches and transcriptomics data generated subsequently to the initial annotations call into question the validity of all but two of these exon annotations.

In addition, twenty nine novel miRNA candidates were predicted based on small RNA reads and precursor prediction.

Candidate novel miRNAs were simultaneously identified from deep sequencing data by miRNA precursor prediction using miRDeep.

While a similar approach has been tried previously with lower numbers of small RNA sequences [14], ours is the first study to combine ultra-deep sequencing, model-based precursor prediction, and validation in Ago2-containing complexes.

Candidates for novel miRNAs were identified by miRNA precursor prediction within miRDeep2.

As a result, external information did not influence either precursor prediction or the associated scores.

For precursor prediction, we used the transcriptome sequences of S. europaea [ 27] to determine inverted repeats and stem-loop structures.