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Precision of assignment to tribe was 0.81 using the "liberal" and 0.95 using the "strict" criterion.
Precision of assignment to subfamily was 0.83 using the "liberal" and 0.96 using the "strict" criterion.
The precision of assignment to genus was 0.86 using the "liberal" and 0.98 using the "strict" criterion.
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Our results consistently indicate that taxator-tk's strength is its high precision of assignments, which allows us to confidently assign a core of sample sequences and thereby to infer the taxonomic composition of the community.
We determined the precision of the assignment to the class "5β-androstanes" by manual inspection.
The results of the assignment for a data set of rare taxa (see Methods) are shown in Additional file 2. Once more, they indicate a high precision of the assignments.
Second, a more comprehensive grid of georeferenced chimpanzee samples that includes genotype profiles at more STRP loci may make it possible to increase the precision of origin assignments using the SCAT approach.
Thus, although mtDNA by itself is a powerful tool for establishing the provenance of elephants (Tables S4, S5, Figs 4 and S2), mtDNA combined with nuclear markers provides a means for genetically triangulating the geographic origin of confiscated ivory, increasing the accuracy and precision of geographic assignments (Fig. 5).
Alternate transcript processing can be detected due to the precision of SAGE tag assignment [ 18].
To estimate the precision of the score assignment, bootstrapping was used to draw 450 random samples from the original 12,650 patients with replacement.
In addition, we observe in Figure 1a to Figure 1d that the precision of high confidence assignments is higher than the average precision of all assignments, and is relatively constant for all k-mer length.
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