Your English writing platform
Discover LudwigSuggestions(1)
Exact(4)
The rationale for using these filters are that the region with a potential varietal SNP should be covered by two sequence tags from each variety and that the potential varietal SNP should have a 1 3 ratio.
Our analyses generated a large number of potential varietal SNPs (~38 K) across a range of commercial varieties that form the base for much of the diversity in commercial cotton breeding in Australia and elsewhere.
We investigated different combinations of the input sequence format and variation detection modules and found that potential varietal SNPs between two tetraploid cotton varieties could be quite accurately called using a nonredundant read set and the "quality-based variation detection" module by following the criteria detailed in the section Materials and Methods.
Our approach avoided the problem associated with the AutoSNP approach, i.e., false SNP calls caused by differential or biased allelic expression, and adopted the advantage of the separate subgenome alignment approach, i.e., use of subgenome-specific SNPs to distinguish reads from the two subgenomes, which makes it possible to more confidently call a potential varietal SNP (Table 3).
Similar(56)
Artificial neural networks (ANNs), when combined with digital imaging, may have potential for varietal identification.
This combination of circumstances leads to poorly balanced wines that are microbiologically unstable with reduced aging potential and varietal aroma [ 22, 23].
The results showed that the ANN, combined with image analysis has excellent potential for wheat varietal identification.
To further examine the potential for geographic and varietal genetic variation, Wei et al. (2011) employed AFLP and SRAP to examine the relationship between cultivated accessions of E. rutaecarpa var.
The objectives of the present study were to develop SNP markers through the data mining of transcriptome data from longan and lychee and assess their potential application for longan varietal identification.
The objectives of the present study were to develop SNP markers through the data mining of EST databases of tea plants and assess their potential application for tea varietal identification.
Development of allele-specific markers for eight yield-enhancing genes was conducted as a part of our breeding program for increasing genetic yield potential in 12 elite indica varietal backgrounds (Table 1).
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com