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Three fields were used for cell counting at 400X magnification by an experienced pathologist (SBG), with posterior calculation of the number of cells per mm.
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The computational complexity of the exact posterior calculation will not scale well to long-range models.
The above structure facilitates the posterior calculations in a closed form.
After 750,000 generations, trees were saved and 250 of them with standard deviation of split frequency < 0.01 were used later for the calculation of posterior probability.
The methodology also permits easy calculation of posterior intervals, whereas the calculation of variances for posterior probability estimates from multilevel logistic models in a frequentist setting would have been enormously difficult.
Geweke, J. Evaluating the accuracy of sampling-based approaches to the calculation of posterior moments.
The numerical calculation of posterior probabilities can be done without using Monte-Carlo simulations nor specialised software tools.
The numerical calculation of posterior probabilities can be done without using Monte-Carlo methods nor specialised software tools.
This choice also tends to "let the data speak for themselves", giving a higher importance to the likelihood function in the calculation of posterior probabilities.
A Bayesian approach allows calculation of posterior probabilities of estimated phylogeny and alignment, which is a measure of the confidence in these estimates.
For calculation of posterior probabilities with MrBayes at least 25,000 cycles were used.
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