Exact(2)
"If we are going to survive we have put ourselves in the worst possible starting position but I still feel we can gain the points we need to succeed.
For the first question, the pre-condition for computing the GMS across the genome is that all possible reads should be considered at every possible starting position, and the correct mapping location for every read is known.
Similar(58)
With so many possible starting positions, a knowledge of regular chess openings is not much use.
In filtering, a quick first step is used to rule out almost all positions of a text as possible starting positions for a pattern.
The method is based upon running deterministic tractography from all possible starting positions in the brain and selecting trajectories that intersect both regions.
Since the key width of an index (w) here is less than the read length, we are able to apply the mask at all possible starting positions offset from the beginning of the read to increase the number of lookups performed per read and thus further improve sensitivity.
Thus, we need to consider all (n - l + 1) t possible starting positions or candidates for motifs.
Since there are L − l + 1 possible starting positions for such reads, x(w i ) has a Poisson distribution with parameter λ = α(L − ll + 1) (this parameter represents the effective coverage [ 27, 28]).
In other words, if M and N are the number of possible starting positions for the motif in the sub-region and in a whole single sequence, respectively, the uniform prior suggests that a random best site would fall in the sub-region with probability.
Although path lengths swum may be initially not significantly shorter than for the scanning or chaining strategy directed search is usually the beginning of a subsequent refinement in the efficiency to reach the goal platform from each possible start position.
Positions within the alignment where all genomes shared a possible start position were identified.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com