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FDR is a false positive calculation method that, instead of controlling the chance of any false positives (as Bonferroni), controls the expected proportion of false positives.
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Clan members were furthermore excluded from false positive calculations.
CLAN members were again excluded from false positive calculations.
All other related Pfam families found in the same region were excluded from false positive calculations next to the CLAN members also used in GenThreader and HMMerThread searches.
Numbers of >20 persons provide minimal, but acceptable, reliability in the percentage-positive calculations.
L1 positivity in either test was counted as positive for calculation of the detection rate.
This was done because the metric chosen to compare BLAST outputs was e-value, a measure of probability of matching a query to its target by chance (essentially calculating the likelihood of a false positive) whose calculation is dependent upon the size of the database being queried.
Especially within the quantitative analyses, the results indicate that economic consideration of the respective renewable energy system, understood as a positive cost benefit calculation made by the individual, is the strongest predictor for a reported acceptance.
In cases where only one duplicate HIV-1 PCR was positive and/or calculation resulted in less than 1 nominal copy number per reaction, HIV-1 nucleic acid copy numbers were censored to 1 copy per PCR [11], [12].
The thresholds for C1, C2, and C3 are based on a 1-sided positive CUSUM calculation (13, 14, 18 ).
To determine the selective pressures that may have triggered the evolution of the FFAR2 gene clusters in the chicken genome, we conducted two different analyses, the gene conversion events detection and the positive selection calculation.
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