Sentence examples for position on the microarray from inspiring English sources

To have a single reference measurement, fitted values (inferred from the Loess regression curve) were averaged for each position on the microarray.

This step is performed by the Affymetrix software and returns a CEL file as an output, in which each probe, at a specific position on the microarray, has a signal intensity assigned to it.

Probe-wise analysis of 450k arrays was performed by first adjusting for technical confounding effects; DNA methylation levels at each CpG locus were adjusted using a generalised linear model (GLM) with beta-distributed response [ 49] including microarray and position on the microarray as technical confounders.

Break sites were randomized by randomly selecting an equal number of positions on the microarray.

A kinetic analysis allows gene expression levels to be measured by their positions on the microarray and level of hybridization (measured by signal intensity) to be detected for each probe.

Therefore, we compared the effects of the probe position on the Affymetrix microarray data and the effects of the tag position on the MPSS data.

On the basis of this calculation, we determined the probability of detecting copy-number variations of different sizes onto a genomic microarray, taking into account the number and genomic position of all targets on the microarray platform used.

The software automatically positions a grid and finds the centroid positions of each feature on the microarray.

An oligo sequence that is located on a specific bead or position on a microarray is usually referred to as the probe sequence, or just as the probe.

To reveal substrate sequence requirements for resveratrol-dependent activation or inhibition of deacetylation, we statistically analyzed the differently responding substrate groups for amino acid preferences, at each peptide position, compared to the overall occurrence on the microarray.

The "defect profile" plots (plots of the normalized hybridization signal vs. defect position – e.g. in Fig. 2) show that the dominant parameter determining oligonucleotide probe-target-affinity – on the microarray surface – is the position of the defect.