Sentence examples for position is covered from inspiring English sources

By 'correctly predicting a position' we mean that at least one sequence segment containing the position is covered.

However, the relevant position is covered by two reads only, and after Beagle imputation, we could indeed observe heterozygosity that was subsequently confirmed by Sanger sequencing.

Assemblies were searched for single nucleotide polymorphisms (SNPs) that fulfilled the following two criteria: (a) the SNP position is covered at least by two reads from each genotype, and (b) at least 80% of the reads call the SNP in the particular genotype.

Each nucleotide position was covered by a mean of 18 reads in the diploid chromosomal region (two copies).

In the design that we ordered, each target position was covered by four different probes resulting in 30 bp offset between the probes.

60mer probes were chosen to match stretches along the entire genome [27] starting at genomic position 823 with an interval of 30 nucleotides, such that every position was covered by two probes.

This allowed sufficient overlap so that each position was covered at least twice.

No mtDNA position was covered by fewer than two sequencing reads.

The TN reference base was called if the quality score was at least 30 and the position was covered by at least 5 reads.

A variant position (SNP) was called if the position was covered by at least 5 reads and the fraction of mapped reads containing the SNP was at least 90%.

The munged reads were aligned by Maq, with default parameters, to the reference sequence for each marker and the genotype called, based on counts of the bases read at the SNP position, but only if the SNP position was covered by at least 20 high quality reads (otherwise the allele is defined as unclassified, U) using Perl script BAT_SNPs.pl (Additional file 8).