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It turned out they were poor matches for me.
We found a very good correlation for LFY; decent matches for AG, SEP3, HY5 and AP3/PI; and poor matches for AP2 and AGL15 from this analysis.
Given this requirement, we can design spaced seed templates (Ma et al., 2002) spanning the entire read (Jiang and Wong, 2008; Lin et al., 2008; Smith et al., 2008), or quickly filter out poor matches, for example, by applying q-gram filtration (Rumble et al., 2009; Weese et al., 2009) or by bounding the search process (Li and Durbin, 2009), and thus accelerate the alignment.
Similar(57)
The dm = 556 nm particle sintering and nano-roughness are the poor match for heat pipes.
The Colonial house, with its stark saltbox lines, seems a poor match for a porch.
But IBRA's sheepskins proved a poor match for Suharto's cronies.
But late in the game she withdrew, deeming the part a poor match for her voice.
The Bulgarian offered no excuses, saying: "It was a very poor match for me.
Of the remaining three, Thomas's physique makes him a poor match for Pujols.
The second problem with incremental solutions is that often they are a poor match for problems that are evolving.
But even proud old Oakland was a poor match for the tornado that battered downtown Atlanta in March.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com