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A further 2765 (36.3%) of the player alignment answers were identical to those from software.
DOI: http://dx.doi.org/10.7554/eLife.07460.007 In total, in 57,834 cases, the player alignment differed from the alignment produced by the computational method.
However, player alignment start position was set to start of the read, regardless of whether a read was soft clipped or not.
For initial comparison of puzzles, position-corrected player alignment CIGARs were compared with BWA CIGAR strings from score adjusted BWA realignments.
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Player alignments were stored in CIGAR format (Li et al., 2009) with associated alignment start position.
Alignment score calculation within the game window was normalized per base to be comparable between software and player alignments.
Puzzles, which had all the high-scoring player alignments different to software, were selected, and individual read alignments from these puzzles were extracted and compared to the software read alignments.
At some point, Girardi said, he intends to settle on a consistent three-player alignment.
After backing his players' alignment with Concerned Student 1950, Pinkel reportedly spent the next few days in public backtrack mode, trying to gently separate himself from the movement a little more each time he was asked about.
Although Syracuse is known for its 2-3 zone defense, which maximizes the effectiveness of the long reach of its players, the alignment is worthless if there is no time to establish it.
It was a case of club and player in perfect alignment.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com