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We also determined whether CNVs called on these platforms were detected by Illumina Hap550 beadchips or SMRT 32 K BAC whole genome tiling arrays and tested 15 of the 30 trios on Affymetrix 6.0 SNP arrays.
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Almost all of the transcripts represented on each platform were detected in adult male and female brains, and there was a general concordance between the platforms on the estimated log2-fold changes for the transcripts they had in common.
The analysis of the expression levels of prohormone gene reporters from two cattle microarray experiments indicated that all prohormone genes present in the platform were detected [see Additional file 2].
The third platform was detected by a station in the Arctic Svalbard archipelago.
Similarly, for Group V, one subgroup of classes that appears to be missing density in the same region of the platform was detected.
In this paper, the insulation and decomposition characteristics of C5F10O/air gas mixture were examined using gas-insulation performance test platform, and decomposition products were detected by gas chromatography mass spectrometry.
We queried 2 collections of genes: 1) 10 transcripts that exhibited a broad range (> 3 orders of magnitude, i.e. more than 10 PCR cycles) of normalized read counts, 6 of which are well-studied in platelets; and, 2) 89 transcripts for GPCR signaling proteins from a commercial platform, 19 of which were detected using both RNA-seq and qRT-PCR.
Pathway analysis was carried out using the complete content of each microarray platform for those probesets that were detected (present/marginal) and differentially expressed (1.3-fold + t test) in the sensitive and resistant experiments and pathways were selected that contained greater than 15 genes (sensitive experiment) and 10 genes (resistant experiment) per pathway.
When we compared the 146 miRNAs detected by NGS to the 173 miRNAs identified by qRT-PCR, we observed that although 60 were detected by both platforms, 87 were detected only by NGS and 111 were specific to TLDA-A.
In addition, a significant number of signals were detected by the GeneChip platform and were not detected by the CodeLink platform.
We have shown that the proposed micro-retroreflector-based platform can be detected with OCT at depths reaching 1.65 mm in whole milk and 0.91 mm in porcine tissue, which is generally less than maximum penetration depths achievable by OCT.
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