Sentence examples for plant alignment from inspiring English sources

From the perspective of land plant alignments, matK is also problematic, as it was difficult to align seed plants with other land plants (e.g., the seed plant alignment took about two person days to complete and carefully check for the current small sample of taxa).

Future work will involve paralleling different stages of the algorithm (such as step 2 and 3 of the segmentation, the leaves segmentations, or the computation of the metrics from Eq. (1) in the plant alignment) and utilising cluster and cloud computing technologies to access more important computational resources.

However, in general where we observed well supported taxon splits within genera, these also corresponded to monophyletic species in a combined analysis of a seed-plant alignment of the four coding regions (see Results), suggesting that this source of bias, if it occurs here at all, may be minor.

Our species monophyly estimates were all obtained in the context of individual genera (see Materials and Methods), and so it is notable that all genera were supported as clades at the current limited taxon samplings in analysis of this seed-plant alignment (data not shown).

as well as planting alignments are quite important.

The bootstrap values generated from a seed-plant-wide alignment of the four coding regions using the 'fast bootstrap' option in PAUP* [19], generally agreed well with values generated using this gene combination for each genus considered separately.

A total of 24,591 genes were detected in roots from Pi-deficient and Pi-sufficient plants by alignment to the TAIR10 annotation of the Arabidopsis genome.

In these plant studies, the alignment of full-length cDNAs and expressed sequence tags (ESTs) to the genome sequence was used to identify the sense-antisense transcript pairs, which is limited to the detection of cis-encoded pairs.

As a counter selection, all matches were removed from further analyses for which a Caenorhabditis spp. hit was within 15% of the BLAST score of the best plant or microbe alignment.

Ten plants were randomly assigned for protection by a windbreak shield, while the other ten plants had similar alignment, but without the windbreak (Fig. 3).

To understand the conservation of the TPX2 domain in plants, a multiple alignment was made with DNA sequences of the extended TPX2 domain within the M20L sequences.