Sentence examples for pita software from inspiring English sources
The target genes predicted by miRanda were verified by TargetScan and PITA software.
Using predicted microRNA targets from miRanda, TargetScan and PITA software, they predicted microRNA targets on both mRNAs and lincRNAs; The mRNAs and lincRNAs that had statistically significant target sites for a particular microRNA were proposed to have a "competing endogenous" relationship.
Ponstingl et al improved the PQS method and also constructed the software PITA for inferring the biological interfaces and assemblies (Ponstingl et al 2000, 2003).
Before buying pita, squeeze the package to ensure freshness.
To address concerns over potential target prediction bias by PITA, we performed target prediction by miRanda software [ 51].
Canonical hsa-mir-4640 hsa-mir-4640 hsa-mir-4640ng 6 differentargetst prediction algorithms (TargetScan, miRNAorg, Microcosm Targets, PITA, PICTAR and miRDB) using MiRGator v3 softwere [ 77].
Targets were only further considered when predicted by at least three out of 11 target prediction programs (PITA, PicTar, miRanda, mirTarget2, TargetScan, NBmirTar, RNAhybrid, MicroInspector, MiTarget, RNA22 and DIANA MicroT), using the online software miRECORDS [ 30].
