Sentence examples for pipeline database from inspiring English sources
When a user retrieves a collection through the Pipeline database interface, the LONI Pipeline can automatically generate a study design module – e.g., an IDAGet or XNATGet module for retrieving all the neuroimaging data included in the study design module.
Simple sequence repeats and other low complexity regions were extracted from the REPET pipeline database and processed with a custom Perl script to calculate the total coverage of these types of repetitive DNA by omitting overlaps with transposable element or other repetitive element annotations.
The draft sequence was sent to the Microbial Genome Annotation Pipeline (MiGAP, Database Center for Life Science, Japan) for annotation.
TAT is responsible for formulating and directing the research analysis and the development of the SpliVaP pipeline & database.
JC developed the pipeline and database.
JLJ designed and implemented the data pipeline and database.
The FixPred computational pipeline and database (http://www.fixpred.com) are easily accessible through a simple web interface coupled to a powerful query engine and a standard web service.
Prevent manual data handling: all analyses are scripted to minimize human error by fully automating the pipeline from database to publication quality graphics and tables.
SC performed and structured all the bioinformatics pipeline and database; MA performed the selection and recombination analysis as well as the phylogenetic reconstructions.
Because there is no pipeline or database addressing IDPs in trypanosomatids, the pipeline described here represents the first attempt to establish possible correlations between protein function and structural disorder in these eukaryotes.
All sequence contigs > 1,000 bp within the assembled sequences were analyzed using a variety of sequence similarity searches and gene prediction algorithms that have been incorporated into an in-house computational pipeline and database [ 58] described previously [ 53].
