Sentence examples for phylogenetic analyzing from inspiring English sources

Moreover, the proposed method compares organisms based on information extracted from their whole genomes and thus considers more function-related characteristics than traditional phylogenetic analyzing strategies do.

I distinguish two approaches to incorporating phylogenetic information: analyzing the phylogenetic composition and the phylogenetic structure of communities.

All the phylogenetic analyzes were developed using Mega 4.1 program (Molecular Evolutionary Genetics Analysis).

Load imbalance can deteriorate parallel efficiency in partitioned phylogenetic analyzes.

PM carried out the phylogenetic analyzes and participated in the design of the study and the writing of the manuscript.

The virtual machine image created for CloudBioLinux contains a set of bioinformatics applications (more than 135) for constructing MSA, clustering, assembly, display and editing, and phylogenetic analyzes.

Maximum likelihood phylogenetic analyzes (with heuristic tree searches) were carried out using PAUP*4.0b10 [ 79] on the freely available Bioportal (http://www.bioportal.uio.no).uio.no

The Blast and phylogenetic analyzes confirmed the transferred status of the annotated genes embedded in the detected regions (Table 4, Additional file 2, Figure 3 and Additional file 4).

We obtained information of two different types on the origin of the transfers in A. fumigatus: one for genes only with the BlastP and the phylogenetic analyzes and another for whole HT regions with the signature analysis.

ASZ and RV carried out the molecular biology studies and the bioinformatic analyzes; FAOM and MJS participated in the molecular biology studies and helped analyzing the data; FTSN, LEVB and MV carried out the phylogenetic analyzes; FTSN designed and coordinated the study, and wrote the manuscript.

However, many newly sequenced genomes were analyzed for horizontally transferred genes (HGT) and in some cases a large number of HGTs were detected by phylogenetic analyzes (for instance 587 genes - 5.6% of all genes - were found of bacterial origin in the diatom P. tricornutum [ 44]).