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To obtain a more comprehensive view of runt-1 function during its initial phase of expression we used a microarray to identify genes that are mis-expressed in blastula stage runt-1 morphants.
On the other hand, the delayed phase of expression of clock genes can first be observed in evening-phased genes and only later in morning-phased genes.
We present a method, SC2P, that identifies the phase of expression a gene is in, by taking into account of both cell- and gene-specific contexts, in a model-based and data-driven fashion.
Undeniably, RV presents a series of advantages as it can virtually identify all potential antigens coded by a genome, irrespective of their abundance, phase of expression and immunogenicity.
Blue-to-red color set represents diurnal phase of expression in (A) rice seedlings and (B) Arabidopsis seedlings.
(PPTX 127 KB) 12284_2012_51_MOESM10_ESM.pptx Additional file 10 Querying for the diurnal phase of expression in a subset of rice genes using PathVisio.
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HAYSTACK conducts a least square linear regression for each gene against all the models and calculates the best-fit model, phase-of-expression, and p-value for each gene.
Finally, we have proposed the expression of different techniques used in value engineering with different phases of expression during the life of IT projects, using techniques based on the proposals presented.
We suspect that differential phasing of expression of the sigma factors may contribute significantly to the diel expression patterns of the rest of the transcriptome.
Genetic analyses of HoxD gene regulation in mice have shown that the two phases of expression within the limb buds result from two independent waves of transcriptional activation.
The longest transcript, sept9a_tv1, has two phases of expression; one during the late blastula and early gastrula stages, and a second beginning during early somitogenesis.
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