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The periodic class is characterized by the interspike intervals that appear repeatedly at regular intervals, and 21 of 53 fibers (39.6%) fell into this category.
Distribution of the fraction of combinations in rules that had a subset in another periodic class.
Table 5 shows the ratio between expected and observed numbers and the corresponding p-values for each periodic class.
The average length and number of combinations retrieved in each periodic class is shown in Table 9.
Indeed, what we see is many different mechanisms describing different subsets of genes within each periodic class.
Intrigued by this observation, we calculated the fraction of combinations found in each periodic class for which subsets could be found in other classes.
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In this way we eliminated the possibility that the overrepresentation we saw in periodic classes was the result of genes observed as periodically expressed in at least one experiment, but that the actual assignment of genes into periodic classes was random.
Periodic classes.
Periodic classes were computationally inferred from expression measurements.
CRA inferred periodic classes and did the statistical analysis.
Although the functional signatures of the other periodic classes were rather specific, all periodic classes had some functions that were overrepresented only in that class.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com