Sentence examples for performing an alignment from inspiring English sources

RNA-editing events were compared to other plant species by obtaining sequences from genbank with RNA-editing information and performing an alignment.

Current methods for predicting genes using ESTs generally work by first performing an alignment of expressed sequence tags onto a target genomic region and then combining the alignment results with ab initio gene predictions [ 22].

After filtering for sequence Quality Value (minimum QV ≥10 for the first 10 bases) and performing an alignment with MirBase (version 19), 11 there were 148 mature miRNAs in antrum without tumor mucosa.

We also performed an alignment of the 14 enriched scaffolds with top 20 compounds of the active dataset (Figure 4).

For each query position q identified in Step 2, we perform an alignment with the seed S inserted in its corresponding position to generate the final alignments.

We obtained the PCA genome sequence, translated ORFs, and functional annotation from NCBI (RefSeq ID NC_002939) and the RefSeq database [16] and performed an alignment using BLAST [11].

We performed an alignment compared with Arabidopsis thaliana (Supplementary Figure  1).

First 10 sequences were taken to perform an alignment of them.

To perform an alignment of the reads against all possible CYP2D6 alleles, we constructed each allele at basepair resolution.

Two of the methods, MAFFT and hmmalign, are exceptionally fast and perform an alignment in seconds (Table 1).

After manually editing for base call errors, we performed an alignment between homologous regions obtained in extant and ancient individuals.