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We performed benchmark studies on the molecular geometry, electron properties and vibrational analysis of imidazole using semi-empirical, density functional theory and post Hartree-Fock methods.
A performed benchmark (Schudoma et al., 2010) showed that homology modeling approach as implemented in RLooM yielded more accurate structural predictions than an ab initio-based modeling server [the iFoldRNA webserver (Sharma et al., 2008)] for target sequences with available sequence-similar template structures.
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To validate the model we have implemented it in the Squeak Smalltalk environment, and performed benchmarks.
We performed benchmarks of phylogenetic grammar-based ncRNA gene prediction, experimenting with eight different models of structural evolution and two different programs for genome alignment.
SINA was able to achieve higher accuracy than PyNAST and mothur in all performed benchmarks.
We performed benchmarks for DNA as well as for protein alignment.
We performed benchmarking tests on a large set of nucleic acid and protein sequences For protein benchmarks we used the benchmark database BALIBASE 3 and an updated release of the database IRMBASE 2 for assessing the quality on globally and locally related sequences, respectively.
Industry experts are more cautious, awaiting the chance to perform benchmark tests.
We analyze the accuracy and the stability of the new scheme, and perform benchmark tests.
The SET Index was the second-best performing benchmark equity index in east Asia in 2010, after Indonesia, posting a 41% gain.
As this model will be compared to other forecast techniques within the Earthquake Forecasting Testing Experiment for Japan initiative, we do not perform benchmark comparisons here.
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