Exact(4)
Direct utilization of them cannot guarantee the best performance in ranking applications as ranking information (e.g., relevance degree label) is absent.
RF is selected to find SNP combinations because of its effective performance in ranking the causal SNPs.
Table 2 showed that the proposed method achieved better performance in ranking known breast cancer genes.
Results showed that the proposed method exhibited better performance in ranking known breast cancer genes and higher robustness against data noise than the random walk approach.
Similar(56)
This difficulty in predicting binding affinities is also reflected in its mediocre performances in ranking ligands bound to the same protein and of virtual screening experiments, although comparable to other available docking methods.
This performance was followed in ranking by 20 tons ha−1 PM (157.4 cm) and 10 tons ha−1 PM (Table 3).
Figure 2 shows the performance of PPCheck in ranking the native-like poses in top-1, top-5, top-10, and top-20 positions.
In case of PRP which is a parameter-based method, we selected a back probability of 0.3 since we have shown previously that the performance of PRP in ranking candidate disease genes was best at p = 0.3 [ 28].
Compared to the well established random walk approach, it showed better performance in correctly ranking cancer genes and worked robustly with respect to noise within source data.
Each protein in the dataset is represented as a probability distribution over the latent topics discovered by LDA and is used as a query for evaluating performance of our method in ranking its structural neighbors.
To evaluate the performance of AD4 and Vina in ranking the small molecules from DSII and DUD, each compound was docked against a single HIV protease structure.
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