Exact(1)
We also compared the percentage of mapped reads for each transcript from the bowtie2 local alignments and the estimated percentages of read counts per transcript with RSEM.
Similar(59)
Read counts and percentage of read positions with an average base quality over 30.
gThe percentages of reads account for the total reads.
hThe percentages of reads account for the mapped reads.
Left panel: percentage of reads mapped to genome, and the percentages of reads that are unique ('percent_unique') and mapping to rRNA ('percent_ribo') out of those mapped.
Note: The percentages of reads containing N, adaptors, low quality, clean reads.
The unmapped percentages of reads were found to be lower (between 12.6% and 15.9%).
First, we compared the percentages of reads assigned by the methods to true taxa.
The percentages of reads assigned by the methods to taxa are shown in Supplementary Figures S1 S18.
Numbers and percentages of reads, mapped to different NCBI taxonomy, COG, KEGG, and CAZy terms.
The percentages of reads mapped to our reference transcriptome were all above 97 %.
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