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RFLP patterns were compared by using computer-assisted (Gelcompar 4.1; Applied Maths, Kortrijk, Belgium) visual comparison.
PFGE fingerprint patterns were compared by using the criteria of Tenover et al. (13 ).
The RFLP band patterns were compared by using the BioNumerics software package version 5.1 (Applied Maths, Kortrijk, Belgium).
RFLP patterns were compared by using Bioimage Whole Band Analyzer software version 4.2.1 (Bioimage Corp., Ann Arbor, MI, USA) (24 ).
PFGE patterns were compared by using BioNumerics software (Applied Maths, Sint-Martens-Latem, Belgium) with the Dice coefficient and a 1% band matching criterion (20 ).
Pulsed-field gel electrophoresis (PFGE) of ApaI-digested genomic DNA was performed in the blaVIM-1-positive isolates, and the banding patterns were compared by using criteria proposed by Tenover et al. (13 ).
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In Table 1, the performance of each CFA pattern is compared by using objective metrics for the test images captured by our experimental equipment.
Grade of histological gastritis between different types of micro-mucosal pattern was compared by using the Wilcoxon signed rank test.
The patterns obtained were compared by using the SITVIT2 proprietary database of the Pasteur Institute of Guadeloupe, which is an updated in-house version of the publicly released SpolDB4 [ 6] and SITVITWEB [ 7] databases.
Pulsed-field gel electrophoresis (PFGE) patterns of isolates were compared by using PulseNet (3 ).
The banding patterns of the isolates were compared by using Bionumerics (Applied Maths, Sint-Martens-Latem, Belgium).
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