We were able to observe at the following patterns in the pairs of paralogs that are likely to evolve asymmetrically.
However, when the stress pattern in the pair of pseudowords was identical, no activation was observed.
The paralogous gene pairs, GmCOL1/ 2 or GmCOL5/ 13, showed similar expression patterns in pair but different between pairs, indicating that they functionally diverged.
Then, a horizontal split rule is used to adjust the length of periodic patterns in each pair such that composition rule can be applied.
Another observation concerns POM5, which shows a unique binding pattern on several PrP molecules (Figure 5A), just like it showed a unique POM-competition pattern in the pair-wise mapping experiments (Figure 4C).
Here, we examine speciation patterns in a pair of sister species of mouse lemur, Microcebus murinus and M. griseorufus.
Using the principal component values, we estimated the similarity between the patterns in any pair of landscapes as the negative Euclidean distance between their principal component values (Frey and Dueck 2007).
For example with δ i = 1, one expression value of m i,j = 2.49 is discretized to 2, while the other of m i,j m i',j = 2.51 is discretized to 3. If the similarity between item 2 and item 3 is not considered as in previous pattern mining algorithms, this pair of similar expressions is lost during discretization.
Moreover, we found similar methylation patterns in tumor pairs from the same patient.
Differentiation of recrudescences from new infections was achieved by comparing PCR-generated P. falciparum msp1 and msp2 genotype patterns in matched pairs of isolates obtained on admission and on the day of reappearance of parasitaemia [42].
