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Full line: P = 1.10−5 Fig. 3 Manhattan plot and pattern of linkage disequilibrium (LDheatmap) in the PI33 target zone.
Resequencing can be used to identify genetic variation within a species and to assess the population structure and the pattern of linkage disequilibrium.
Full line: P = 1.10−5 Fig. 5 Manhattan plot and pattern of linkage disequilibrium (LDheatmap) around the Pi35, PI37, Pish cluster of NB-LRR.
This analysis shows that the pattern of linkage disequilibrium over the tau region is shared by different ethnic groups indicating that haplotype structure in human is ancient.
The overall pattern of linkage paths among the ecologically fragile areas could help identify the areas with high ecological risk in Changzhou.
Both the optimal marker density for genome scans in case-control association studies and the appropriate study design for the testing of candidate genes depend on the genomic pattern of linkage disequilibrium (LD).
Surprisingly, we found a diverse pattern of linkage for three epitopes from three proteins.
We analyzed the pattern of linkage disequilibrium across GYPB from HapMap data and selected two tag-SNPs (that can be used as surrogate for untested SNPs, due to the pattern of linkage disequilibrium): rs4835511 and rs9685167.
To ask whether this pattern of linkage could occur by chance we used in silico re-pooling to determine how often artifactual regions of linkage occur randomly.
After large-scale SNP discovery, it is crucial to gain an understanding of the pattern of linkage disequilibrium (LD) and population structure in the species of interest.
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Co-citations represent intellectual relationships between journals and have been used to study the specialty structure of science through the pattern of linkages, to monitor the development of scientific fields, and to assess developing interrelationships [ 27].
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