Sentence examples for pathways we conducted from inspiring English sources

To systematically determine the roles of proteins in canonical TLR signaling pathways, we conducted an RNA interference (RNAi based screen in human and mouse macrophages.

To identify the main mechanisms behind the evolution of respiratory pathways, we conducted a phylogenomics survey of oxidative phosphorylation components in the genomes of sixty fungal species.

To assess if the genes associated with differential methylation were enriched in some biological processes or pathways, we conducted gene ontology and pathway analyses using the DMGs.

To explore if sensitivity-based epistatic analysis can be used to identify functional complexes and pathways, we conducted hierarchical clustering of S-score profiles (see Methods).

To evaluate unigene representation in essential metabolic pathways, we conducted a reciprocal BLAST analysis on the translated G. clavigera unigene ORFs against the annotated Magnaporthe grisea and Aspergillus fumigatus protein datasets downloaded from the Broad Institute (http://www.broadinstitute.org/).org/

To discern the structural basis for product specificity in both cisoid and transoid cyclization pathways, we conducted a comparative analysis of wild-type TEAS and M4 mutant structures with particular attention focused on the active site contour and farnesyl chain binding modes.

To identify genes required for this PCD pathway, we conducted a genetic screen for suppressors of acd11, here called lazarus (laz) mutants.

To examine this possibility and to determine if this particular effect of atRA (stimulation of HDAC3-PML complex formation in the nucleus) was dependent upon the ERK2 pathway, we conducted siRNA-mediated knockdown of ERK2 and monitored subcellular distribution of HDAC3 and formation of HDAC-PML complex (Fig. 3B).

To test the aryne desaturation pathway, we conducted the tandem reaction in the absence of air.

To computationally examine the conformation and intrinsic energetics of the cisoid cyclization pathway, we conducted density functional theory (DFT) calculations.

Given the unexpected number of horizontal or endosymbiotic gene transfers in the aspartate pathway and the converged pathway, we conducted evolutionary analyses for kynurenine pathway enzymes.