Sentence examples for pathway-based data analysis from inspiring English sources
This tool can also be used to perform pathway-based data analysis by using high quality human-curated pathways in the Reactome database, the most comprehensive open source pathway database.
Pathway- and network-based data analysis approaches project information about seemingly unrelated genes and proteins onto pathway and network contexts, and create an integrated view for researchers to understand mechanisms related to phenotypes of interest.
This app provides a suite of features to assist biologists in performing pathway- and network-based data analysis in a biologically intuitive and user-friendly way.
In this paper, we describe a software tool called ReactomeFIViz (also called the Reactome FI Cytoscape app or ReactomeFIPlugIn), which can be used to perform pathway- and network-based data analysis for data generated from high-throughput experiments.
By providing this web service, we hope to help researchers and developers build tools for pathway-based research and data analysis.
For example, a pathway-based analysis using data from the first published ASD genome-wide single nucleotide polymorphism (SNP) association study implicated the cadherin gene family.
Our Cytoscape app provides a suite of features for users to perform network- and pathway-based analysis for data generated from multiple experiments related to cancer and other complex diseases.
Compared with pathway-based analysis, network-based analysis may have the following advantages.
Zhao et al. [62] proposed a novel pathway analysis approach, called smoothed functional principal component analysis (SFPCA), for pathway-based association analysis on NGS data.
We have previously developed logistic PCA (LPCA) methods [ 13, 24] for geneand pathway-based analysis of SNP data by explicitly modeling the categorical nature of SNP data.
Our results demonstrate that systematic clinically oriented pathway-based analysis of genomic data can accelerate the discovery of rare genetic disorders.
