Exact(3)
Data of patients who were treated in the comprehensive care pathway were compared with data of a historical control group.
Patients experiencing the QoL pathway were compared with standard follow-up and treatment according to German Cancer Society breast cancer guideline.
To confirm that the same is true of CLL cells, CLL samples with functional impairment of the p53 pathway were compared with samples that had no such dysfunction.
Similar(57)
The TolC export pathway is compared with several import pathways of Gram-negative bacteria where the outer membrane protein structures are also known.
A strain expressing XR and XDH and harbouring a bacterial arabinose utilisation pathway was compared with an isogenic strain instead expressing the XI xylose utilisation pathway.
Hence, inclusion of the CO model is critical in allaying model uncertainty, because it assures that the amount of metabolism predicted to occur via the saturable pathway is compared with a metabolic product specific to that pathway.
RS analysis uses a more stringent selection process in which the actual enrichment score of each pathway is compared with the scores obtained by the permutation of labels an approach similar to that used in GSEA and with the scores for sets composed of randomly selected genes [ 17]. † No. of pathways found dysregulated by RS and GSEA with p-values < 0.05.
Subsequently, proteins of unique MRSA pathways were compared with the host proteins.
Expression levels of the marker genes, which are involved in different process relevant pathways, were compared with extracellular process parameters from the cultures, such as specific growth rates, production rates of secreted enzymes and availability of nutrients and oxygen.
We considered early (8 and 24 h) and late (48 and 96 h) stages in this analysis and the top 10 enriched canonical pathways were compared with results from GSEA (data not shown).
When the ability to degrade sugar was strain-dependent, all protein sequences corresponding to transporters or enzymes involved in the pathway were compared by multiple alignments with other orthologues.
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