Sentence examples for pathway scanning from inspiring English sources

Gentrepid uses two modules: Common Pathway Scanning (CPS) and Common Module Profiling (CMP) to make candidate gene predictions.

Using the software tool GSEA for pathway scanning [ 11], components of the TGF-β pathway were found to be over-represented among these genes.

The Gentrepid tool and its knowledge base utilizes two independent methods: Common Pathway Scanning (CPS), a systems biology approach; and Common Module Profiling (CMP), a domain-based homology recognition approach, to prioritize candidate genes for human inherited disorders (see Methods for details).

We evaluated the phosphorylation levels of key transcription factors in tOASFs using a commercial pathway scan kit.

Using a commercial pathway scan kit and western blotting (Supplementary Figure S2), the activation levels of inflammatory-associated key intracellular signaling proteins in tOASFs were evaluated.

However, such an issue should be less pronounced for our a priori selected pathway scan than for a full genome scan (which leads to numerous posthoc tests), and the P-values associated with our analysis of the age-1 region suggest that statistical significance of our findings will be robust to moderate adjustment of the significance threshold (Supporting Information, Table S1).

In order to identify potential hsa-miR29b targets, which are specific to lung cancer and tumor suppressor pathway, we scanned for hsa-miR29b targets in silico (http://www.microrna.org; Table 2).

To explore how miR-26a regulates proinflammatory cytokine production in chondrocytes, several inflammatory signalling pathways were scanned (data not shown).

Given the results of the present and previous studies, it is hypothesized that the IFG is activated via a different neural pathway from scanning strategy and activities in the fusiform gyrus.

As an alternative analysis, we subjected the iTreg- and Teff-characteristic gene lists to a pathway analysis scanning immune and cancer pathways pre-loaded in GeneSpring GX10, human metabolic pathways from the KEGG database and human pathways from the Nature Pathway Interaction database (Fig. S1C).

Pathway's test scans an individual's DNA to provide information on the person's risk of getting about two dozen diseases.