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MDR pathogens were identified in 8 (21%).
Pathogens were identified in 79 (59%) patients.
A wide range of bacteria including pathogens were identified.
Two hundred and thirty-five causative pathogens were identified.
The number of colonies per plate was counted and transient pathogens were identified.
The isolated pathogens were identified based on morphology, the Slidex® Staph Plus latex agglutination test and the API-Staph® identification test (bioMérieux, Marcy l'Etoile, France) [23].
Study design: Pathogens were identified by culturing or polymerase chain reaction (PCR) from 2215 patients with suspected PID between 1 January 1999 and 31 December 2001.
Suspected bacterial pathogens were identified as Streptococcus pneumoniae and Porphyromonas gingivalis.
When pathogens were identified, Shigella spp. and Salmonella spp. were the most common bacteria, while Isospora spp. and Cryptosporidium spp. were the most common parasites.
Six coral pathogens were identified with close 16S rRNA gene phylogenetic affiliation with the previously identified coral pathogen V. coralliilyticus [14].
Pathogens were identified by standard criteria [ 20].
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