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In summary, directionality theory shows that during the fluctuating (opportunistic) competitive growth phase of multi-strain pathogen epidemic establishment it is short infectious duration (low entropy) strains that are favoured over longer infectious duration (higher entropy) strains.
Recovery indicators (Stage R) reflect a return to normal conditions following a plant pest or pathogen epidemic.
Indirect indicators are events resulting as a consequence of a plant pest or pathogen epidemic (e.g. pesticide shortage, farmer anxiety, food shortage).
In contrast, the comparatively low diversity of vc groups observed for the subspecies americana is atypical of an established pathogen epidemic, although rapidly expanding pathogen populations have previously been reported to exhibit low genetic diversity [ 10].
During an emerging pathogen epidemic, it is important to investigate deaths occurring outside of traditional settings to determine if sudden deaths occurring in the community are a result of the novel pathogen.
WNV, Chikungunya virus and avian influenza showed citation curves similar to the Type I pathogen epidemic curves; however, they are re-emergent and thus referred to as Type Ia (Fig. 3), with an increase in relative citations beginning at the time of the re-emergence of the pathogen.
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Because of the intensive mode of production, they are highly susceptible to pathogen epidemics that can cause huge economic losses.
Plant pest and pathogen epidemics can profoundly impact society by affecting food security, human and animal health, and economic stability (1– 3).
Over 5,000 total articles and 239 unique articles (i.e. articles providing new information) on rice pest and pathogen epidemics were identified during the study period.
This study demonstrates that Internet sources can provide important information for monitoring plant pest and pathogen epidemics at the local level.
Here we show that aDNA methods hold similar promise for plant pathology and that they can improve our understanding of historically important plant pathogen epidemics.
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