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Since we will look for a shortest path, paths going through segments with high densities are preferred.
The number of alternative paths between two metabolites may, however, be large and restricting the search to all the shortest or lightest (the weight is given by the sum of the out-degrees of the vertices in the path) paths between pairs of metabolites seems to be a realistic compromise.
The number of paths, path location (in the delay domain), and path attenuation can be derived by the supporting software.
This guidance procedure was repeated starting the MPDC from 5 different locations forming 5 paths (Path A to Path E in Figure 3(a)).
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-type path Path based fingerprints encode paths of length 0 7.
Figure 5 Quality of path: path length, multiplicity, and usage.
forward/reverse path: path to the destination/source node.
Table 6 Results of significance test for paths of the model Path Path coefficient S.E.
Route lengthsRoute multiplicityRoute usage Figure 6 Quality of path: path correspondence.
This can also be seen in Fig. 5 which shows the mean (± SE) for the results for a different path (path 2) plotted in the same format.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com