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The program was designed to partition individuals into whatever pre-specified number of clusters the researcher requests, regardless of whether that number of divisions really exists in nature.
In short, these methods attempt to partition individuals into groups at Hardy-Weinberg equilibrium.
S TRUCTURE applies a Bayesian Markov chain Monte Carlo (MCMC) approach that uses model-based clustering to partition individuals into groups.
Put differently, to maintain genomic information in the face of deleterious mutations and genetic drift, it is advantageous to partition individuals into multiple (smaller) subpopulations and let them "cross-reference" each other's genetic information through recombination rather than collect all individuals in one population and thereby maximize the efficacy of natural selection.
Thus, to maintain genomic information in the face of Muller's ratchet, it is more advantageous to partition individuals into multiple subpopulations and let them "cross-reference" each other's genetic information through HGT than to collect all individuals in one population and thereby maximize the efficacy of natural selection.
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The reanalysis of the data, using HLM methodology, was designed to partition individual differences from aggregate group variance, as well as to test a number of focused hypotheses regarding the effects of gender and gender-ratio in class on self-concept.
Methods for assessing multilevel data [ 22, 23, 25] make it possible to partition individual, establishment and community level effects, thereby allowing researchers to obtain more precise measures of standard errors, resulting in more accurate analysis that takes into account the nested structure of the data.
Figure 2 shows that the K-means clustering partitioned individuals into related groups with decreased relationship between groups.
These results show that the K-means clustering successfully partitioned individuals into related groups with reduced relationships between groups.
STRUCTURE then partitioned individuals of the sample according to the membership coefficient Q, that ranges from 0 (lowest affinity to the group) to 1 (highest affinity to a group), across K groups.
Each sample of P. downsi individuals taken from an independent bird nest was run in COLONY 1.2, which uses a maximum likelihood method that partitions individuals into pure full-sib families (i.e. monogamous female parent), or full-sib families nested within half-sib families (i.e. polyandrous female parent) using progeny genotypes without known parental genotypes [ 37, 38].
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